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  5. Ore_g35893

Ore_g35893 (TPR16)


Aliases : TPR16

Description : not classified & original description: none


Gene families : OG0001935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g35893
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT5G12430 TPR16 Heat shock protein DnaJ with tetratricopeptide repeat 0.02 OrthoFinder output from all 47 species
Adi_g060655 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087246 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35461 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12835 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04505 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G058300.1 TPR16, Ceric.28G058300 not classified & original description: pacid=50570376... 0.03 OrthoFinder output from all 47 species
Ceric.31G035700.1 TPR16, Ceric.31G035700 not classified & original description: pacid=50573879... 0.02 OrthoFinder output from all 47 species
Ehy_g02947 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32058 TPR16 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01005044001 TPR16 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os05g31056.1 TPR16, LOC_Os05g31056 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g31062.1 TPR16, LOC_Os05g31062 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_15894g0010 TPR16 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g16220.1 TPR16 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g03217 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05014 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g39794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02425 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38094 TPR16 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e017287_P001 TPR16, Zm00001e017287 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026765_P001 Zm00001e026765 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031378_P001 TPR16, Zm00001e031378 TPR repeat-containing thioredoxin TTL2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 1121 1204
No external refs found!