- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PAL4
Description : EC_4.3 carbon-nitrogen lyase & original description: none
Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00202590 | ATPAL2, PAL2,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G53260 | ATPAL2, PAL2 | phenylalanine ammonia-lyase 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059316 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059368 | ATPAL1, PAL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g084112 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g107906 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g24727 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30887 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g37161 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g62284 | ATPAL1, PAL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14595 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02564 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene07514.t1 | PAL4, Aspi01Gene07514 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene20030.t1 | PAL4, Aspi01Gene20030 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03360 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z056200.1 | PAL4, Ceric.1Z056200 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G008000.1 | PAL4, Ceric.28G008000 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G008100.1 | PAL4, Ceric.28G008100 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G045000.1 | PAL4, Ceric.35G045000 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g40579 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g26544 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04952 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08593 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016257001 | ATPAL2, PAL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024292001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025214001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025703001 | ATPAL2, PAL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_21115 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41796 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g41630.2 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g41650.3 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g43760.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| MA_123220g0010 | ATPAL2, PAL2 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_73113g0010 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g10150.1 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g14110.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g37393 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08420 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10582 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27402 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11790 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08363 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g30570 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g056170.3.1 | ATPAL2, PAL2,... | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08001 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16564 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015154_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015155_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | HCCA |
| CC | GO:0005856 | cytoskeleton | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016872 | intramolecular lyase activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 75 | 354 |
| No external refs found! |