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  5. Ore_g33990

Ore_g33990 (TMO6)


Aliases : TMO6

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33990

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.01 OrthoFinder output from all 47 species
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.01 OrthoFinder output from all 47 species
Aspi01Gene13553.t1 CDF3, Aspi01Gene13553 transcription factor *(DOF) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene47016.t1 CDF2, Aspi01Gene47016 transcription factor *(DOF) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene66325.t1 OBP3, Aspi01Gene66325 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0166.g054411 No alias transcription factor *(DOF) & original description: CDS=29-1513 0.04 OrthoFinder output from all 47 species
Ceric.12G067800.1 Ceric.12G067800 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Len_g54993 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
MA_2430g0010 CDF3 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g11078 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30866 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63288 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19758 CDF3 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 97 154
No external refs found!