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  5. Ore_g33878

Ore_g33878 (PUB26)


Aliases : PUB26

Description : not classified & original description: none


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33878

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00199950 evm_27.TU.AmTr_v1... U-box domain-containing protein 31 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00130440 CMPG2, ATCMPG2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G02840 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G19380 PUB25 plant U-box 25 0.03 OrthoFinder output from all 47 species
AT5G09800 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.04 OrthoFinder output from all 47 species
Adi_g003285 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g014414 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077173 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077174 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02169 PUB23 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02974 PUB23 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18167 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21197 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38062 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02187 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06990 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20026 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12715 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23185 CMPG1, ATCMPG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23643 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40105 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60936 PUB25 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11371 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12417 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15330 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16033 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04412 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18761 PUB29, ATPUB29 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39282 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12032.t1 PUB25, Aspi01Gene12032 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene15171.t1 PUB29, ATPUB29,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17992.t1 PUB25, Aspi01Gene17992 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18451.t1 PUB25, Aspi01Gene18451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18452.t1 PUB25, Aspi01Gene18452 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18453.t1 PUB25, Aspi01Gene18453 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18467.t1 PUB23, Aspi01Gene18467 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19337.t1 PUB26, Aspi01Gene19337 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19342.t1 PUB26, Aspi01Gene19342 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19351.t1 Aspi01Gene19351 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19355.t1 PUB26, Aspi01Gene19355 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25347.t1 PUB26, Aspi01Gene25347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27391.t1 PUB26, Aspi01Gene27391 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43214.t1 PUB24, Aspi01Gene43214 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene43215.t1 PUB24, Aspi01Gene43215 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44320.t1 PUB23, Aspi01Gene44320 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51624.t1 PUB15, Aspi01Gene51624 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56365.t1 PUB25, Aspi01Gene56365 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60604.t1 PUB26, Aspi01Gene60604 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043747 PUB26 not classified & original description: CDS=1-1407 0.03 OrthoFinder output from all 47 species
Ceric.08G042000.1 Ceric.08G042000 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G059800.1 PUB26, Ceric.19G059800 not classified & original description: pacid=50575490... 0.04 OrthoFinder output from all 47 species
Dcu_g01209 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01521 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04484 PUB25 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04516 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07421 PUB23 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g18954 PUB25 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26825 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01464 PUB26 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03660 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11880 CMPG1, ATCMPG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14303 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011139001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011140001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011616001 CMPG1, ATCMPG1 U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01026542001 CMPG2, ATCMPG2 U-box domain-containing protein 27 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_02627 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_11650 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_13090 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_17119 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_26429 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_27794 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_29851 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os01g64570.1 PUB23, LOC_Os01g64570 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33680.1 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g34410.1 PUB25, LOC_Os02g34410 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g50460.1 LOC_Os02g50460 U-box domain-containing protein 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g49970.1 PUB23, LOC_Os04g49970 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58920.1 PUB23, LOC_Os04g58920 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os06g13870.1 LOC_Os06g13870 U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g06410.1 PUB24, LOC_Os12g06410 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g01810 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31416 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10425865g0010 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_10432179g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_1663g0020 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_17715g0010 CMPG1, ATCMPG1 U-box domain-containing protein 20 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_311559g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_33190g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_48004g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_481299g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_5536318g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_58844g0020 PUB22 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_684442g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_779502g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_83739g0020 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_95662g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g22740.1 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g11000.1 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g38744 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06628 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09512 PUB29, ATPUB29 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29544 PUB23 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36530 PUB23 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g01233 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12004 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19356 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g27483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18199 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002717 PUB26 not classified & original description: CDS=1-1404 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020660 No alias not classified & original description: CDS=1-1503 0.02 OrthoFinder output from all 47 species
Smo414754 PUB25 U-box domain-containing protein 75 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc01g005160.4.1 Solyc01g005160 U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g007010.2.1 PUB22, Solyc01g007010 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g007050.3.1 PUB24, Solyc01g007050 E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g107980.3.1 PUB26, Solyc01g107980 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g008100.3.1 Solyc04g008100 U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g071030.1.1 Solyc04g071030 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Solyc11g068940.1.1 PUB24, Solyc11g068940 E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Spa_g16409 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06727 PUB26 U-Box-group-III E3 ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007109_P001 PUB23, Zm00001e007109 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e008167_P001 PUB23, Zm00001e008167 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014752_P001 PUB23, Zm00001e014752 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e014766_P001 CMPG2, ATCMPG2,... E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Zm00001e019173_P001 PUB23, Zm00001e019173 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e022679_P001 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 8 76
No external refs found!