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  5. Ore_g33870

Ore_g33870


Description : not classified & original description: none


Gene families : OG0005888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005888_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33870
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Aev_g08118 PIRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22181 PIRL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene61839.t1 PIRL1, Aspi01Gene61839 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038285 No alias not classified & original description: CDS=1-1527 0.04 OrthoFinder output from all 47 species
Dac_g06962 PIRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07770 PIRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56245 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g27973 PIRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08965 PIRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39509 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g48005 PIRL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18165 PIRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g41627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016540 protein autoprocessing IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 323 342
IPR001611 Leu-rich_rpt 252 306
IPR001611 Leu-rich_rpt 159 215
No external refs found!