1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d038745

Zm00001d038745 (GRMZM2G077278, GRMZM2G105401)


Aliases : GRMZM2G077278, GRMZM2G105401

Description : 30.1 signalling.in sugar and nutrient physiology encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)


Gene families : OG_01_0001553 (Gene family) Phylogenetic Tree(s): OG0001553_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d038745
Cluster HCCA cluster: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025806001 No alias 29.4.1 protein.postranslational modification.kinase... 0.03 Gene family
LOC_Os08g37800 Os08g0484600 29.4.1 protein.postranslational modification.kinase... 0.02 Gene family
MA_6373g0010 No alias 30.1 signalling.in sugar and nutrient physiology encodes... 0.02 Gene family
Solyc02g067030.3.1 Solyc02g067030.3 29.4.1 protein.postranslational modification.kinase... 0.02 Gene family
Solyc03g115700.3.1 Solyc03g115700.3 29.4.1 protein.postranslational modification.kinase... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006468 protein phosphorylation IEA InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015940 UBA 289 324
IPR000719 Prot_kinase_dom 14 266
IPR001772 KA1_dom 460 501
No external refs found!