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  5. Ore_g33799

Ore_g33799 (CRM3, HCF152)


Aliases : CRM3, HCF152

Description : not classified & original description: none


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33799

Target Alias Description ECC score Gene Family Method Actions
AT1G68980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G09650 CRM3, HCF152 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G17616 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g059183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G012400.1 Ceric.01G012400 not classified & original description: pacid=50592360... 0.03 OrthoFinder output from all 47 species
Dde_g09114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_08062 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g57900.1 LOC_Os01g57900 Pentatricopeptide repeat-containing protein At1g69290... 0.05 OrthoFinder output from all 47 species
LOC_Os07g31310.1 LOC_Os07g31310 Pentatricopeptide repeat-containing protein At4g17616... 0.03 OrthoFinder output from all 47 species
MA_113202g0010 OTP86 Pentatricopeptide repeat-containing protein At3g09040,... 0.05 OrthoFinder output from all 47 species
MA_46631g0010 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 OrthoFinder output from all 47 species
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 OrthoFinder output from all 47 species
MA_90791g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015033 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.03 OrthoFinder output from all 47 species
Sam_g12114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo105057 LOI1, MEF11 Pentatricopeptide repeat-containing protein At4g14850... 0.03 OrthoFinder output from all 47 species
Smo105853 No alias Pentatricopeptide repeat-containing protein At3g09650,... 0.06 OrthoFinder output from all 47 species
Tin_g11662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019596_P001 Zm00001e019596 Pentatricopeptide repeat-containing protein At1g69290... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 516 558
IPR002885 Pentatricopeptide_repeat 429 487
IPR002885 Pentatricopeptide_repeat 234 294
No external refs found!