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  5. Ore_g33222

Ore_g33222


Description : GARP subgroup HHO transcription factor & original description: none


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33222

Target Alias Description ECC score Gene Family Method Actions
AT1G13300 HRS1 myb-like transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT1G49560 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G68670 No alias myb-like transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT3G25790 No alias myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g019107 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g23352 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene06858.t1 Aspi01Gene06858 GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g22464 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02562 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01031804001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Len_g48276 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03258 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g40586 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_58982g0010 ATCAD9, CAD9 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
Solyc12g006800.2.1 Solyc12g006800 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g55258 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g05995 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016724_P001 Zm00001e016724 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 120 169
No external refs found!