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  5. Ore_g32957

Ore_g32957 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g32957

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene37289.t1 APUM12, PUM12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54829.t1 PUM7, APUM7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009386001 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 663 696
IPR001313 Pumilio_RNA-bd_rpt 516 550
IPR001313 Pumilio_RNA-bd_rpt 777 804
IPR001313 Pumilio_RNA-bd_rpt 590 617
IPR001313 Pumilio_RNA-bd_rpt 699 718
IPR001313 Pumilio_RNA-bd_rpt 552 583
IPR001313 Pumilio_RNA-bd_rpt 736 769
IPR001313 Pumilio_RNA-bd_rpt 629 658
No external refs found!