Zm00001d038618 (GRMZM2G078781)


Aliases : GRMZM2G078781

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent. cyclic nucleotide-gated cation channel 4 (CNGC4)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d038618
Cluster HCCA cluster: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.02 Gene family
MA_167620g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Smo113786 PACid_15418666 No description available 0.02 Gene family
Solyc06g051920.3.1 Solyc06g051920.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
Solyc09g007840.3.1 Solyc09g007840.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 161 396
IPR000595 cNMP-bd_dom 491 578
No external refs found!