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  5. Ore_g32654

Ore_g32654


Description : not classified & original description: none


Gene families : OG0013086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g32654
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Mp6g12660.1 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.02 OrthoFinder output from all 47 species
Sam_g35064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo425968 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 173 208
IPR002885 Pentatricopeptide_repeat 78 118
IPR002885 Pentatricopeptide_repeat 147 171
No external refs found!