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  5. Ore_g32238

Ore_g32238 (CDC20.2)


Aliases : CDC20.2

Description : substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex & original description: none


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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    Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


    Type Description Actions
    Neighborhood HRR: Ore_g32238
    Cluster HCCA: Cluster_78

    Target Alias Description ECC score Gene Family Method Actions
    AT4G33260 CDC20.2 Transducin family protein / WD-40 repeat family protein 0.02 OrthoFinder output from all 47 species
    AT4G33270 CDC20.1 Transducin family protein / WD-40 repeat family protein 0.04 OrthoFinder output from all 47 species
    Cre09.g399911 CDC20.2 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.01 OrthoFinder output from all 47 species
    LOC_Os04g51110.1 CDC20.1, LOC_Os04g51110 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.03 OrthoFinder output from all 47 species
    Mp3g00030.1 CDC20.2 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.02 OrthoFinder output from all 47 species
    Pp3c8_6330V3.1 CDC20.2, Pp3c8_6330 Transducin family protein / WD-40 repeat family protein 0.02 OrthoFinder output from all 47 species
    Solyc03g095210.2.1 CDC20.2, Solyc03g095210 Cell division cycle 20.2, cofactor of APC complex... 0.02 OrthoFinder output from all 47 species
    Zm00001e023310_P002 CDC20.2, Zm00001e023310 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.02 OrthoFinder output from all 47 species

    Type GO Term Name Evidence Source
    MF GO:0005515 protein binding IEA Interproscan
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    Type GO Term Name Evidence Source
    MF GO:0000166 nucleotide binding IEP HCCA
    MF GO:0003774 cytoskeletal motor activity IEP HCCA
    MF GO:0003777 microtubule motor activity IEP HCCA
    MF GO:0005524 ATP binding IEP HCCA
    BP GO:0007017 microtubule-based process IEP HCCA
    BP GO:0007018 microtubule-based movement IEP HCCA
    MF GO:0008017 microtubule binding IEP HCCA
    MF GO:0008092 cytoskeletal protein binding IEP HCCA
    MF GO:0015631 tubulin binding IEP HCCA
    MF GO:0017076 purine nucleotide binding IEP HCCA
    MF GO:0030554 adenyl nucleotide binding IEP HCCA
    MF GO:0032553 ribonucleotide binding IEP HCCA
    MF GO:0032555 purine ribonucleotide binding IEP HCCA
    MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
    MF GO:0036094 small molecule binding IEP HCCA
    MF GO:0043167 ion binding IEP HCCA
    MF GO:0043168 anion binding IEP HCCA
    MF GO:0097367 carbohydrate derivative binding IEP HCCA
    MF GO:0140657 ATP-dependent activity IEP HCCA
    MF GO:1901265 nucleoside phosphate binding IEP HCCA
    InterPro domains Description Start Stop
    IPR024977 Apc4_WD40_dom 196 253
    IPR001680 WD40_repeat 321 357
    IPR001680 WD40_repeat 407 442
    IPR001680 WD40_repeat 277 312
    No external refs found!