Zm00001d038478 (GRMZM2G390436)


Aliases : GRMZM2G390436

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d038478
Cluster HCCA cluster: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g60730 Os01g0822800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g15110 Os02g0249200 No description available 0.02 Gene family
LOC_Os02g57460 Os02g0820200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os03g28080 Os03g0398600 No description available 0.04 Gene family
LOC_Os05g40020 Os05g0478000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g34400 Os06g0534900,... No description available 0.03 Gene family
LOC_Os11g47690 Os11g0703200 No description available 0.02 Gene family
MA_6934973g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_77628g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc00g007220.3.1 Solyc00g007220.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc03g005490.3.1 Solyc03g005490.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc05g005790.3.1 Solyc05g005790.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 126 169
No external refs found!