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  5. Ore_g31230

Ore_g31230 (SWC2, ATSWC2)


Aliases : SWC2, ATSWC2

Description : component *(SWC2) of SWR1 chromatin remodeling complex & original description: none


Gene families : OG0007616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g31230

Target Alias Description ECC score Gene Family Method Actions
Mp1g21470.1 SWC2, ATSWC2 component SWC2 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Solyc04g009830.3.1 SWC2, ATSWC2,... component SWC2 of SWR1 chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription regulator complex IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR046757 YL1_N 13 252
IPR013272 Vps72/YL1_C 283 311
No external refs found!