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  5. Ore_g30872

Ore_g30872


Description : not classified & original description: none


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30872

Target Alias Description ECC score Gene Family Method Actions
AT3G29575 AFP3 ABI five binding protein 3 0.04 OrthoFinder output from all 47 species
Aspi01Gene30684.t1 NINJA, Aspi01Gene30684 transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g09497 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008104001 AFP3 RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 OrthoFinder output from all 47 species
LOC_Os03g30570.1 AFP2, LOC_Os03g30570 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
MA_16384g0010 AFP3 transcriptional co-repressor (AFP/NINJA) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001786 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 657 693
No external refs found!