Ore_g30699

Description : mTERF-type transcription factor & original description: none

Gene families : OG0006555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006555_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g30699

Target	Alias	Description	ECC score	Gene Family Method
Ceric.24G048200.1	Ceric.24G048200	mTERF-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001269.6	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g00348	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g06210	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02069	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
LOC_Os03g62240.1	LOC_Os03g62240	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Lfl_g03783	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Mp5g01460.1	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Nbi_g00558	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15492	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e006303_P001	Zm00001e006303	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	167	232

External Links

No external refs found!