1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g30552

Ore_g30552 (ATNFXL1, NFXL1)


Aliases : ATNFXL1, NFXL1

Description : transcriptional repressor *(NF-X1) & original description: none


Gene families : OG0006722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006722_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30552

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020537.42 ATNFXL1, NFXL1 NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os06g14190.1 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.02 OrthoFinder output from all 47 species
Msp_g41199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38467 No alias transcriptional repressor *(NF-X1) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g118420.4.1 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.04 OrthoFinder output from all 47 species
Zm00001e036022_P001 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR000967 Znf_NFX1 504 521
IPR000967 Znf_NFX1 568 586
IPR000967 Znf_NFX1 734 751
IPR000967 Znf_NFX1 386 401
IPR000967 Znf_NFX1 440 458
IPR000967 Znf_NFX1 787 802
IPR000967 Znf_NFX1 641 652
IPR000967 Znf_NFX1 677 694
No external refs found!