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  5. Aev_g17458

Aev_g17458


Description : not classified & original description: none


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g17458

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00035310 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00089p00172750 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00700p00004930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.09 OrthoFinder output from all 47 species
AT4G17140 No alias pleckstrin homology (PH) domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g011982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05070 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g21604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42699.t1 Aspi01Gene42699 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55587.t1 Aspi01Gene55587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55589.t1 Aspi01Gene55589 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011871 No alias not classified & original description: CDS=1-5496 0.02 OrthoFinder output from all 47 species
Azfi_s0185.g056668 No alias not classified & original description: CDS=100-1869 0.04 OrthoFinder output from all 47 species
Ceric.09G071300.1 Ceric.09G071300 not classified & original description: pacid=50588528... 0.06 OrthoFinder output from all 47 species
Ceric.09G071400.1 Ceric.09G071400 not classified & original description: pacid=50587640... 0.02 OrthoFinder output from all 47 species
Ceric.21G079300.1 Ceric.21G079300 not classified & original description: pacid=50602615... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001343.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021428.20 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre17.g728250 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g730650 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g12732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26863 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19066 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01013268001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_15429 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g27110.1 LOC_Os02g27110 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g08664 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g03526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
MA_342412g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_74056g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g08780.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g07570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g07580.2 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005700 No alias not classified & original description: CDS=17-12964 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018244 No alias not classified & original description: CDS=306-11297 0.04 OrthoFinder output from all 47 species
Sam_g04392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo440026 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo444980 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc09g009350.2.1 Solyc09g009350 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g009370.4.1 Solyc09g009370 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Spa_g09459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR031646 VPS13_extend_chorein 141 387
IPR031642 VPS13_mid_RBG 584 819
IPR000008 C2_dom 2687 2805
IPR010482 Peroxin 2970 3082
IPR009543 VPS13_VAB 3460 3653
IPR009291 Vps62 2046 2193
IPR009291 Vps62 4400 4535
IPR009291 Vps62 2292 2434
IPR026854 VPS13-like_N 2 115
No external refs found!