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  5. Ore_g30320

Ore_g30320


Description : RsmH-type rRNA methyltransferase *(CMAL) & original description: none


Gene families : OG0006770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30320

Target Alias Description ECC score Gene Family Method Actions
AT5G10910 No alias mraW methylase family protein 0.03 OrthoFinder output from all 47 species
Ala_g28546 No alias RsmH-type rRNA methyltransferase *(CMAL) & original... 0.04 OrthoFinder output from all 47 species
Als_g10620 No alias RsmH-type rRNA methyltransferase *(CMAL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01035599001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g04500.2 LOC_Os02g04500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11880 No alias RsmH-type rRNA methyltransferase *(CMAL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13045 No alias RsmH-type rRNA methyltransferase *(CMAL) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g14639 No alias RsmH-type rRNA methyltransferase *(CMAL) & original... 0.04 OrthoFinder output from all 47 species
Solyc11g005580.1.1 Solyc11g005580 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013613_P005 Zm00001e013613 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002903 RsmH 267 613
No external refs found!