Ore_g30030


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30030

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00062p00213230 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00172440 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00155p00018120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
AT3G02330 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g013701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043528 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40066 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009227 No alias not classified & original description: CDS=1-1950 0.03 OrthoFinder output from all 47 species
Cba_g06916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07175 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g29798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75109 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.07 OrthoFinder output from all 47 species
Ceric.12G021300.1 Ceric.12G021300 not classified & original description: pacid=50600778... 0.02 OrthoFinder output from all 47 species
Ceric.18G077400.1 Ceric.18G077400 not classified & original description: pacid=50622022... 0.04 OrthoFinder output from all 47 species
Ceric.32G014100.1 Ceric.32G014100 not classified & original description: pacid=50597391... 0.03 OrthoFinder output from all 47 species
Ceric.39G043600.1 Ceric.39G043600 not classified & original description: pacid=50582616... 0.03 OrthoFinder output from all 47 species
Dac_g42743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23389 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24823 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g05370 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06187 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25262 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426261g0020 CRR22 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_14659g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Nbi_g23766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27428 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g01775 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g03029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03200 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g05580 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12881 RARE1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g19780 OTP84 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g19959 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35307 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g35403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36479 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g10363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_16110V3.1 CRR22, Pp3c14_16110 Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g22255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34092 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo138948 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.02 OrthoFinder output from all 47 species
Smo99677 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Solyc02g082160.2.1 CRR22, Solyc02g082160 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Tin_g19873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 4 51
IPR002885 Pentatricopeptide_repeat 206 253
IPR002885 Pentatricopeptide_repeat 80 105
IPR002885 Pentatricopeptide_repeat 310 328
IPR002885 Pentatricopeptide_repeat 108 137
IPR002885 Pentatricopeptide_repeat 282 304
IPR002885 Pentatricopeptide_repeat 181 205
No external refs found!