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Ore_g29974 (PRHA)


Aliases : PRHA

Description : PHD-type transcription factor & original description: none


Gene families : OG0002217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29974
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00159760 PRHA,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Ala_g13053 PRHA PHD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05279 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010860001 PRHA RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01037894001 HAT3.1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Pir_g11750 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027428_P001 HAT3.1, Zm00001e027428 transcription factor (PHD) 0.02 OrthoFinder output from all 47 species
Zm00001e029056_P003 HAT3.1, Zm00001e029056 transcription factor (PHD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 590 634
IPR019787 Znf_PHD-finger 306 361
No external refs found!