Ore_g29922 (ARA-1, ATRABA5E,...)


Aliases : ARA-1, ATRABA5E, RABA5E, ATRAB11D, ARA

Description : A-class RAB GTPase & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29922
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT5G60860 AtRABA1f, RABA1f RAB GTPase homolog A1F 0.04 OrthoFinder output from all 47 species
Aspi01Gene60173.t1 AtRABA1f,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27141 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051301 cell division IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 180
No external refs found!