Aliases : TOP1BETA, TOP1
Description : DNA topoisomerase *(TOP1) & original description: none
Gene families : OG0002461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002461_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00193620 | MGO1, TOP1,... | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.02 | OrthoFinder output from all 47 species | |
AT5G55300 | MGO1, TOP1, TOP1ALPHA | DNA topoisomerase I alpha | 0.03 | OrthoFinder output from all 47 species | |
Adi_g104710 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g13391 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.07G062200.1 | TOP1BETA, TOP1,... | DNA topoisomerase *(TOP1) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.22G051300.1 | TOP1BETA, TOP1,... | DNA topoisomerase *(TOP1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01020301001 | MGO1, TOP1, TOP1ALPHA | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.02 | OrthoFinder output from all 47 species | |
Gb_13084 | TOP1BETA, TOP1 | DNA topoisomerase (TOP1) | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g04991 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp6g05370.1 | TOP1BETA, TOP1 | DNA topoisomerase (TOP1) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g13694 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g05911 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g03945 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g04685 | TOP1BETA, TOP1 | DNA topoisomerase *(TOP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo152781 | TOP1BETA, TOP1 | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g049720.4.1 | MGO1, TOP1,... | DNA topoisomerase (TOP1) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEA | Interproscan |
BP | GO:0006265 | DNA topological change | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0031491 | nucleosome binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No external refs found! |