Zm00001d038208 (GRMZM2G016817)


Aliases : GRMZM2G016817

Description : 27.3.2 RNA.regulation of transcription.Alfin-like AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. alfin-like 4 (AL4)


Gene families : OG_01_0000165 (Gene family) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d038208
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT3G42790 AL3 alfin-like 3 0.03 Gene family
LOC_Os05g34640 Os05g0419100 27.3.2 RNA.regulation of transcription.Alfin-like AL4... 0.03 Gene family
LOC_Os11g14010 Os11g0244800 27.3.2 RNA.regulation of transcription.Alfin-like AL7... 0.03 Gene family
Solyc01g102760.3.1 Solyc01g102760.3 27.3.2 RNA.regulation of transcription.Alfin-like AL7... 0.02 Gene family
Solyc03g121930.3.1 Solyc03g121930.3 27.3.2 RNA.regulation of transcription.Alfin-like AL4... 0.02 Gene family
Solyc07g041190.3.1 Solyc07g041190.3 27.3.2 RNA.regulation of transcription.Alfin-like AL5... 0.03 Gene family
Zm00001d022110 GRMZM2G038066 27.3.2 RNA.regulation of transcription.Alfin-like AL4... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0042393 histone binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021998 Alfin 13 140
IPR019787 Znf_PHD-finger 203 251
No external refs found!