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  5. Ore_g29143

Ore_g29143


Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29143
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT2G46780 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Aev_g25590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51493.t1 Aspi01Gene51493 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011816 No alias not classified & original description: CDS=390-1343 0.02 OrthoFinder output from all 47 species
Ceric.23G019900.1 Ceric.23G019900 not classified & original description: pacid=50610174... 0.03 OrthoFinder output from all 47 species
GSVIVT01009045001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g15889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44319 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 25 81
No external refs found!