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  5. Ore_g29064

Ore_g29064 (SCR, SGR1)


Aliases : SCR, SGR1

Description : GRAS-type transcription factor & original description: none


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29064

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270570 RGL2,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00207840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.06 OrthoFinder output from all 47 species
AMTR_s00122p00135250 RGA, RGA1,... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Ala_g27684 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Als_g26688 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32212.t1 RGL1, RGL,... GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g029812 RGL2 GRAS-type transcription factor & original description: CDS=1-2046 0.03 OrthoFinder output from all 47 species
Dac_g09377 RGA2, GAI transcription factor *(DELLA) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g38769 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g25487 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011710001 RGA, RGA1 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
Gb_32252 RGA, RGA1 DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
Len_g48752 RGL1, RGL GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04248 RGA2, GAI transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430831g0010 RGA2, GAI DELLA-type gibberellin signal transducer. transcription... 0.05 OrthoFinder output from all 47 species
Mp5g20660.1 RGA2, GAI DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
Msp_g38765 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g29234 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g32765 RGA, RGA1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33996 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Smo139506 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
Solyc10g086370.1.1 RGA, RGA1, Solyc10g086370 DELLA-type gibberellin signal transducer. transcription... 0.08 OrthoFinder output from all 47 species
Spa_g13334 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 206 566
No external refs found!