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  5. Ore_g29053

Ore_g29053 (KNAT3)


Aliases : KNAT3

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29053
Cluster
 HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT1G23380 KNAT6, KNAT6L, KNAT6S KNOTTED1-like homeobox gene 6 0.02 OrthoFinder output from all 47 species
Ala_g13443 KNAT3 KNOX-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g08128 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23513 KNAT5 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30189 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06749 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49428.t1 KNAT3, Aspi01Gene49428 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009595 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=1-1050 0.03 OrthoFinder output from all 47 species
Azfi_s0574.g078063 KNAT3 KNOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01012897001 KNAT3 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03770.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
LOC_Os08g19650.1 KNAT3, LOC_Os08g19650 transcription factor (KNOX) 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019793 KNAT4 KNOX-type transcription factor & original description: CDS=1-1188 0.02 OrthoFinder output from all 47 species
Smo135843 KNAT4 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Solyc12g010410.3.1 KNAT4, Solyc12g010410 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Spa_g40064 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005540 KNOX1 45 84
IPR005541 KNOX2 106 153
No external refs found!