Ore_g29040 (AthREP, REP)

Aliases : AthREP, REP

Description : accessory component of RAB-GTPase geranylgeranyltransferase (RGT) complex & original description: none

Gene families : OG0004631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004631_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g29040
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AT3G06540	AthREP, REP	Rab escort protein	0.03	OrthoFinder output from all 47 species
Adi_g104081	AthREP, REP	accessory component of RAB-GTPase...	0.02	OrthoFinder output from all 47 species
Ceric.26G050100.1	AthREP, REP,...	accessory component of RAB-GTPase...	0.03	OrthoFinder output from all 47 species
LOC_Os01g16354.1	AthREP, REP,...	accessory subunit of RAB-GTPase...	0.02	OrthoFinder output from all 47 species
Nbi_g24877	AthREP, REP	accessory component of RAB-GTPase...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018203	GDP_dissociation_inhibitor	19	65
IPR018203	GDP_dissociation_inhibitor	111	357

External Links

No external refs found!