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  5. Ore_g28894

Ore_g28894


Description : not classified & original description: none


Gene families : OG0002651 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28894
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00195320 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G02990 No alias BEST Arabidopsis thaliana protein match is: CW-type Zinc... 0.04 OrthoFinder output from all 47 species
AT3G62900 No alias CW-type Zinc Finger 0.06 OrthoFinder output from all 47 species
AT4G15730 No alias CW-type Zinc Finger 0.03 OrthoFinder output from all 47 species
Aev_g43022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G045900.1 Ceric.34G045900 not classified & original description: pacid=50623623... 0.04 OrthoFinder output from all 47 species
Dac_g09109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010964001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01017765001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_16688 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g22580.2 LOC_Os03g22580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g18072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g19200.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g14759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo426541 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e010934_P001 Zm00001e010934 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027207_P002 Zm00001e027207 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035816_P001 Zm00001e035816 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 754 799
No external refs found!