Description : component *(NSP2) of NSP1-NSP2 nodulation initiation complex & original description: none
Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g28747 | |
Cluster | HCCA: Cluster_27 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00030p00099410 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g023237 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g043317 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g048227 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g055203 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g058149 | No alias | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g068840 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g087308 | No alias | GRAS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Adi_g088062 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g115825 | RGA2, GAI | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g19082 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g11867 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g09046 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g05346 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g51091 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008901001 | No alias | External stimuli response.biotic... | 0.03 | OrthoFinder output from all 47 species | |
Len_g24236 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g13409 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g12779 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g09457 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g12299 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Ore_g30474 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g09579 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g24950 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g10282 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005506 | iron ion binding | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | HCCA |
MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | HCCA |
MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0016744 | transketolase or transaldolase activity | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005202 | TF_GRAS | 193 | 568 |
No external refs found! |