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  5. Ore_g28378

Ore_g28378


Description : not classified & original description: none


Gene families : OG0001254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28378
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Als_g14963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67035.t1 Aspi01Gene67035 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67036.t1 Aspi01Gene67036 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67041.t1 Aspi01Gene67041 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G017100.1 Ceric.05G017100 not classified & original description: pacid=50578327... 0.03 OrthoFinder output from all 47 species
Ceric.05G017300.1 Ceric.05G017300 not classified & original description: pacid=50578516... 0.02 OrthoFinder output from all 47 species
Ceric.24G035600.1 Ceric.24G035600 not classified & original description: pacid=50629765... 0.02 OrthoFinder output from all 47 species
Dac_g27300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02857 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017112 No alias not classified & original description: CDS=1-1176 0.03 OrthoFinder output from all 47 species
Spa_g13009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003796 lysozyme activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 261 299
No external refs found!