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Description : not classified & original description: none
Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g28257 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00196350 | evm_27.TU.AmTr_v1... | Putative ripening-related protein 2 OS=Oryza sativa... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00002p00197000 | evm_27.TU.AmTr_v1... | Putative ripening-related protein 1 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00005p00207640 | evm_27.TU.AmTr_v1... | Ripening-related protein grip22 OS=Vitis vinifera | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00005p00208720 | evm_27.TU.AmTr_v1... | Ripening-related protein grip22 OS=Vitis vinifera | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00005p00210680 | evm_27.TU.AmTr_v1... | Ripening-related protein grip22 OS=Vitis vinifera | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00011p00263200 | evm_27.TU.AmTr_v1... | Putative ripening-related protein 5 OS=Oryza sativa... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g32825 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g27137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene50260.t1 | Aspi01Gene50260 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene62833.t1 | Aspi01Gene62833 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01026884001 | No alias | Putative ripening-related protein 5 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026887001 | No alias | Putative ripening-related protein 5 OS=Oryza sativa... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os10g34760.1 | LOC_Os10g34760 | Putative ripening-related protein 6 OS=Oryza sativa... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g34770.1 | LOC_Os10g34770 | Putative ripening-related protein 7 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g34840.1 | LOC_Os10g34840 | Ripening-related protein 3 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g34902.1 | LOC_Os10g34902 | Putative ripening-related protein 4 OS=Oryza sativa... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g44254 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g46928 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g47639 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g49301 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g36089 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g13696 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26772 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29185 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g35967 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g36946 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g33994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g33995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g34399 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0135.g022375 | No alias | not classified & original description: CDS=1-585 | 0.03 | OrthoFinder output from all 47 species | |
| Smo430105 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Smo99218 | No alias | Ripening-related protein grip22 OS=Vitis vinifera | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g080950.1.1 | Solyc08g080950 | Putative ripening-related protein 2 OS=Oryza sativa... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc11g069870.1.1 | Solyc11g069870 | Kiwellin OS=Actinidia deliciosa (sp|p84527|kiwel_actde : 170.0) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g069880.1.1 | Solyc11g069880 | Kiwellin OS=Actinidia deliciosa (sp|p84527|kiwel_actde : 219.0) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g32195 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40808 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000270 | peptidoglycan metabolic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003796 | lysozyme activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
| BP | GO:0006027 | glycosaminoglycan catabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009253 | peptidoglycan catabolic process | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
| MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
| BP | GO:0030203 | glycosaminoglycan metabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | HCCA |
| MF | GO:0042887 | amide transmembrane transporter activity | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0061783 | peptidoglycan muralytic activity | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| MF | GO:1904680 | peptide transmembrane transporter activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |