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Description : not classified & original description: none
Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g28256 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00196350 | evm_27.TU.AmTr_v1... | Putative ripening-related protein 2 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00005p00207640 | evm_27.TU.AmTr_v1... | Ripening-related protein grip22 OS=Vitis vinifera | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00005p00208720 | evm_27.TU.AmTr_v1... | Ripening-related protein grip22 OS=Vitis vinifera | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00005p00210680 | evm_27.TU.AmTr_v1... | Ripening-related protein grip22 OS=Vitis vinifera | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00011p00263200 | evm_27.TU.AmTr_v1... | Putative ripening-related protein 5 OS=Oryza sativa... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.32G075600.1 | Ceric.32G075600 | not classified & original description: pacid=50597647... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11809 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025223001 | No alias | Ripening-related protein grip22 OS=Vitis vinifera | 0.02 | OrthoFinder output from all 47 species | |
| Gb_06385 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g42450.1 | LOC_Os02g42450 | Putative ripening-related protein 2 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g29550.1 | LOC_Os04g29550 | Putative ripening-related protein 1 OS=Oryza sativa... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os10g34760.1 | LOC_Os10g34760 | Putative ripening-related protein 6 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g34770.1 | LOC_Os10g34770 | Putative ripening-related protein 7 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44254 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g47639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49301 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g36089 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29187 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g35967 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g36438 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g36946 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g04962 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g21539 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g33994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g33995 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| BP | GO:0016540 | protein autoprocessing | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |