Ore_g28212

Description : not classified & original description: none

Gene families : OG0002241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002241_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g28212
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
Adi_g006702	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g28778	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g09823	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Als_g23569	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g12812	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g13308	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g21532	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ceric.34G006900.1	Ceric.34G006900	not classified & original description: pacid=50624161...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.28	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.01	OrthoFinder output from all 47 species
Dac_g14982	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g02920	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g16519	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g02805	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Gb_15061	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.04	OrthoFinder output from all 47 species
LOC_Os02g18450.1	LOC_Os02g18450	Putative elongation factor TypA-like SVR3, chloroplastic...	0.04	OrthoFinder output from all 47 species
Lfl_g02041	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_138810g0010	No alias	Putative elongation factor TypA-like SVR3, chloroplastic...	0.02	OrthoFinder output from all 47 species
Nbi_g08358	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g19686	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g14425	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19777	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g058190.3.1	Solyc03g058190	Putative elongation factor TypA-like SVR3, chloroplastic...	0.05	OrthoFinder output from all 47 species
Spa_g07228	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Tin_g02062	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e014138_P001	Zm00001e014138	Putative elongation factor TypA-like SVR3, chloroplastic...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	298	367
IPR000640	EFG_V-like	476	559
IPR000795	T_Tr_GTP-bd_dom	83	274

External Links

No external refs found!

Ore_g28212

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation