Ore_g27850 (UBP23)

Aliases : UBP23

Description : deubiquitinase *(UBP23) & original description: none

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g27850

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00135p00021060	UBP16,...	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Adi_g013897	UBP25	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g013898	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g060737	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g069165	UBP23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene49835.t1	UBP18, Aspi01Gene49835	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07711	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g12069	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.22G015900.1	UBP25, Ceric.22G015900	not classified & original description: pacid=50613832...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000663.67	UBP15	Protein degradation.peptidase families.cysteine-type...	0.01	OrthoFinder output from all 47 species
Cre16.g648600	UBP19	No description available	0.02	OrthoFinder output from all 47 species
Dac_g23037	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08851	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g26398	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07912	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g26924	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01000696001	UBP15	Protein degradation.peptidase families.cysteine-type...	0.05	OrthoFinder output from all 47 species
GSVIVT01001911001	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01033166001	UBP18	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
GSVIVT01038082001	UBP25	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Gb_28125	UBP25	deubiquitinase (UBP25)	0.03	OrthoFinder output from all 47 species
LOC_Os02g14730.1	UBP15, LOC_Os02g14730	deubiquitinase (UBP15-21)	0.05	OrthoFinder output from all 47 species
LOC_Os09g28940.1	UBP17, LOC_Os09g28940	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Len_g45877	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03280	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g10823	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g11163	UBP25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10429414g0020	UBP18	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
MA_53569g0010	UBP23	deubiquitinase (UBP23)	0.02	OrthoFinder output from all 47 species
Mp1g03220.1	UBP25	Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Mp2g05560.1	UBP18	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Mp3g16110.1	UBP23	deubiquitinase (UBP23)	0.02	OrthoFinder output from all 47 species
Ore_g22576	UBP25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g05280	UBP25	deubiquitinase *(UBP25) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g25431	UBP16	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g13940	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g15722	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20105	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc04g076210.3.1	UBP16, Solyc04g076210	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Solyc07g061780.4.1	UBP15, Solyc07g061780	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Solyc08g069050.3.1	UBP19, Solyc08g069050	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Zm00001e014332_P001	UBP15, Zm00001e014332	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Zm00001e022516_P001	UBP17, Zm00001e022516	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Zm00001e023273_P001	UBP21, Zm00001e023273	Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e024878_P003	UBP15, Zm00001e024878	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	116	415

External Links

No external refs found!

Ore_g27850 (UBP23)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation