Ore_g27530


Description : not classified & original description: none


Gene families : OG0001686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g27530
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT4G21190 emb1417 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g21409 emb1417 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03710.t1 Aspi01Gene03710 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g035053 emb1417 not classified & original description: CDS=134-1234 0.03 OrthoFinder output from all 47 species
Cba_g10004 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33827 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028826001 emb1417 Pentatricopeptide repeat-containing protein At4g21190... 0.03 OrthoFinder output from all 47 species
LOC_Os01g55290.2 emb1417, LOC_Os01g55290 Pentatricopeptide repeat-containing protein At4g21190... 0.02 OrthoFinder output from all 47 species
Lfl_g05415 emb1417 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09758 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07146 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00768 emb1417 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g071570.4.1 Solyc02g071570 Pentatricopeptide repeat-containing protein At4g18975,... 0.02 OrthoFinder output from all 47 species
Spa_g12796 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!