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  5. Ore_g27400

Ore_g27400


Description : not classified & original description: none


Gene families : OG0001730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g27400
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00104660 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ala_g09256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035636 No alias not classified & original description: CDS=28-522 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065792 No alias not classified & original description: CDS=123-1853 0.02 OrthoFinder output from all 47 species
Ceric.21G079500.1 Ceric.21G079500 not classified & original description: pacid=50604458... 0.02 OrthoFinder output from all 47 species
Ceric.26G006800.1 Ceric.26G006800 not classified & original description: pacid=50599496... 0.03 OrthoFinder output from all 47 species
Dac_g20282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014224001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01016660001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_24726 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g14879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_453783g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g14930.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g18175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439642 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g123700.4.1 Solyc03g123700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g014220.3.1 Solyc12g014220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g21150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003611 NUMOD3 128 153
No external refs found!