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Aliases : ATF1, TRXF1
Description : F-type thioredoxin *(Trx-F) & original description: none
Gene families : OG0001099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001099_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00119540 | ATF1, TRXF1,... | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G02730 | ATF1, TRXF1 | thioredoxin F-type 1 | 0.09 | OrthoFinder output from all 47 species | |
| AT5G16400 | TRXF2, ATF2 | thioredoxin F2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003203 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g03766 | ATF1, TRXF1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g06364 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02991 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00422 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g07635 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02814 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g02927 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06684 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s2245.g109976 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: CDS=10-579 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g71517 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cre05.g243050 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g12943 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25843 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g26362 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01019070001 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20154 | ATF1, TRXF1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g68480.1 | TRXF2, ATF2,... | F-type thioredoxin | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18423 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g11575 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g20740.1 | ATF1, TRXF1 | F-type thioredoxin | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g08490.1 | ATF1, TRXF1 | F-type thioredoxin | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g29081 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g02641 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g65672 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g12320 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g19425 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g00498 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30576 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g33020 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015100 | TRXF2, ATF2 | F-type thioredoxin *(Trx-F) & original description: CDS=110-658 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0134.g022310 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: CDS=118-813 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28295 | No alias | F-type thioredoxin *(Trx-F) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo110708 | TRXF2, ATF2 | Redox homeostasis.chloroplast redox homeostasis.F-type... | 0.03 | OrthoFinder output from all 47 species | |
| Smo77812 | ATH5, ATTRX5, TRX5, LIV1 | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22200 | ATF1, TRXF1 | F-type thioredoxin *(Trx-F) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21213 | TRXF2, ATF2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e027512_P002 | TRXF2, ATF2,... | F-type thioredoxin | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e040421_P002 | TRXF2, ATF2,... | F-type thioredoxin | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 79 | 173 |
| No external refs found! |