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  5. Ore_g26634

Ore_g26634 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g26634

Target Alias Description ECC score Gene Family Method Actions
Msp_g14205 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13626 PDR6, ATPDR6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19906 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22919 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23517 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c23_14810V3.1 ATPDR7, PDR7,... pleiotropic drug resistance 7 0.02 OrthoFinder output from all 47 species
Smo267739 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 136 287
IPR043926 ABCG_dom 19 80
No external refs found!