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  5. Ore_g26350

Ore_g26350 (NFC04, MSI4, NFC4,...)


Aliases : NFC04, MSI4, NFC4, ACG1, FVE, ATMSI4

Description : flowering time factor *(FVE) & original description: none


Gene families : OG0004797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g26350

Target Alias Description ECC score Gene Family Method Actions
Aob_g31637 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.75 NFC04, MSI4,... WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g03538 NFC04, MSI4,... flowering time factor *(FVE) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_32208 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.02 OrthoFinder output from all 47 species
MA_359g0010 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.03 OrthoFinder output from all 47 species
Zm00001e028156_P001 NFC04, MSI4,... component CAF1c/MSI of CAF1 histone chaperone complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 15 81
IPR001680 WD40_repeat 291 323
IPR001680 WD40_repeat 162 197
IPR001680 WD40_repeat 335 372
IPR001680 WD40_repeat 243 278
No external refs found!