Zm00001d037830 (GRMZM2G462625)


Aliases : GRMZM2G462625

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein embryo defective 2261 (EMB2261)


Gene families : OG_01_0000355 (Gene family) Phylogenetic Tree(s): OG0000355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d037830
Cluster HCCA cluster: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT1G25360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
GSVIVT01009866001 No alias No description available 0.03 Gene family
GSVIVT01018922001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os05g12130 Os05g0212100 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.14 Gene family
LOC_Os05g49740 Os05g0572900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os05g50460 Os05g0581300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_10431227g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_83662g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_953240g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Smo444974 PACid_15420556 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc01g097670.3.1 Solyc01g097670.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Solyc11g065250.1.1 Solyc11g065250.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.1 Gene family
Zm00001d009677 GRMZM2G170941,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d021980 GRMZM2G057176 No description available 0.02 Gene family
Zm00001d039078 GRMZM2G163359 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 694 818
IPR002885 Pentatricopeptide_repeat 118 148
IPR002885 Pentatricopeptide_repeat 596 620
IPR002885 Pentatricopeptide_repeat 323 372
IPR002885 Pentatricopeptide_repeat 219 265
IPR002885 Pentatricopeptide_repeat 521 568
No external refs found!