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  5. Ore_g26082

Ore_g26082


Description : GRAS-type transcription factor & original description: none


Gene families : OG0007450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g26082
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Adi_g035020 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13044 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14059 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26400 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01030652001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
LOC_Os07g40020.1 LOC_Os07g40020 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Smo12696 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Solyc07g052960.3.1 Solyc07g052960 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Spa_g11887 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 99 480
No external refs found!