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  5. Ore_g25840

Ore_g25840 (SAMT1, SAMC1)


Aliases : SAMT1, SAMC1

Description : solute transporter *(MTCC) & original description: none


Gene families : OG0003529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25840
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001000.21 SAMT1, SAMC1 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020812.6 No alias Solute transport.carrier-mediated transport.MC-type... 0.01 OrthoFinder output from all 47 species
Mp8g05870.1 SAMT1, SAMC1 solute transporter (MTCC) 0.05 OrthoFinder output from all 47 species
Smo146160 SAMT1, SAMC1 Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder output from all 47 species
Solyc04g051580.4.1 SAMT1, SAMC1,... solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 230 313
IPR018108 Mitochondrial_sb/sol_carrier 134 219
IPR018108 Mitochondrial_sb/sol_carrier 56 128
No external refs found!