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Description : not classified & original description: none
Gene families : OG0002177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002177_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g25684 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00218080 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.18 | OrthoFinder output from all 47 species | |
| AT2G06520 | PSBX | photosystem II subunit X | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g021165 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g024522 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g024523 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g029598 | No alias | component *(PsbX) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g048424 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Aev_g41627 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g10239 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.19 | OrthoFinder output from all 47 species | |
| Ala_g27184 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.18 | OrthoFinder output from all 47 species | |
| Als_g55991 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g14986 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07528 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene08999.t1 | PSBX, Aspi01Gene08999 | component *(PsbX) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene09132.t1 | PSBX, Aspi01Gene09132 | component *(PsbX) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene58924.t1 | PSBX, Aspi01Gene58924 | component *(PsbX) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene59149.t1 | PSBX, Aspi01Gene59149 | component *(PsbX) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023498 | PSBX | component *(PsbX) of PS-II complex & original... | 0.09 | OrthoFinder output from all 47 species | |
| Azfi_s0245.g060001 | No alias | component *(PsbX) of PS-II complex & original... | 0.09 | OrthoFinder output from all 47 species | |
| Cba_g05544 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g22045 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G082200.1 | PSBX, Ceric.04G082200 | component *(PsbX) of PS-II complex & original... | 0.14 | OrthoFinder output from all 47 species | |
| Ceric.24G060900.1 | PSBX, Ceric.24G060900 | component *(PsbX) of PS-II complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g02996 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Dac_g14007 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g17182 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g21257 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g31006 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.15 | OrthoFinder output from all 47 species | |
| Dde_g21199 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g22238 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g23441 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01035449001 | PSBX | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_07296 | PSBX | component PsbX of PS-II complex | 0.06 | OrthoFinder output from all 47 species | |
| Gb_14525 | PSBX | component PsbX of PS-II complex | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g22370.1 | PSBX, LOC_Os03g22370 | component PsbX of PS-II complex | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g47640.1 | PSBX, LOC_Os07g47640 | component PsbX of PS-II complex | 0.1 | OrthoFinder output from all 47 species | |
| Len_g13373 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.15 | OrthoFinder output from all 47 species | |
| Len_g19235 | No alias | component *(PsbX) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10431 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_464043g0010 | PSBX | component PsbX of PS-II complex | 0.13 | OrthoFinder output from all 47 species | |
| Mp6g21460.1 | PSBX | component PsbX of PS-II complex | 0.09 | OrthoFinder output from all 47 species | |
| Pir_g09968 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Pir_g48365 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g06188 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c1_32200V3.1 | PSBX, Pp3c1_32200 | photosystem II subunit X | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c5_17290V3.1 | PSBX, Pp3c5_17290 | photosystem II subunit X | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g04809 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g20878 | No alias | component *(PsbX) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002436 | PSBX | component *(PsbX) of PS-II complex & original... | 0.1 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0155.g023606 | PSBX | component *(PsbX) of PS-II complex & original... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g04554 | No alias | component *(PsbX) of PS-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g28404 | No alias | component *(PsbX) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g025600.1.1 | PSBX, Solyc05g025600 | component PsbX of PS-II complex | 0.11 | OrthoFinder output from all 47 species | |
| Solyc12g150101.1.1 | PSBX, Solyc12g150101 | component PsbX of PS-II complex | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g02683 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g29201 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g35692 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g00078 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g07238 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Tin_g16593 | PSBX | component *(PsbX) of PS-II complex & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e025856_P001 | PSBX, Zm00001e025856 | component PsbX of PS-II complex | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e035834_P001 | PSBX, Zm00001e035834 | component PsbX of PS-II complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004470 | malic enzyme activity | IEP | HCCA |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0030145 | manganese ion binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |