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  5. Ore_g25576

Ore_g25576


Description : regulatory protein *(CBP60) of systemic acquired resistance & original description: none


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25576

Target Alias Description ECC score Gene Family Method Actions
Adi_g015384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074759 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Ala_g20189 No alias regulatory protein *(CBP60) of systemic acquired... 0.04 OrthoFinder output from all 47 species
Aob_g36882 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36646.t2 Aspi01Gene36646 regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Dcu_g11311 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Gb_08701 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os02g35470.1 LOC_Os02g35470 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g32160.1 LOC_Os03g32160 Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g36660.1 LOC_Os04g36660 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_88280g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sam_g34269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51653 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Solyc07g006830.4.1 Solyc07g006830 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g09023 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Tin_g07205 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Zm00001e022743_P001 Zm00001e022743 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR046830 Calmod_bind_M 264 330
IPR046831 Calmodulin_bind_N 105 252
IPR046829 Calmod_bind_C 335 397
No external refs found!