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  5. Ore_g25535

Ore_g25535


Description : not classified & original description: none


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25535

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00044580 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G09840 No alias Putative endonuclease or glycosyl hydrolase 0.04 OrthoFinder output from all 47 species
Adi_g060136 EDA32 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08983 EDA32 endoribonuclease *(MNU) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04911 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026616001 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc11g005440.2.1 Solyc11g005440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g13107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035662_P002 Zm00001e035662 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021139 NYN_MARF1 10 149
No external refs found!