Ore_g25528 (BP, BP1, KNAT1)

Aliases : BP, BP1, KNAT1

Description : KNOX-type transcription factor & original description: none

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g25528
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
Adi_g058538	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g107007	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49532.t1	BP, BP1, KNAT1,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013790001	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Len_g00731	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g05424	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g17777	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g19225	KNAT3	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g25139	KNAT3	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g25529	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g27266	No alias	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo135843	KNAT4	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Spa_g15450	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e011538_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e027562_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e029453_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004357	glutamate-cysteine ligase activity	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005539	ELK_dom	290	309
IPR005541	KNOX2	197	242
IPR005540	KNOX1	145	185
IPR008422	Homeobox_KN_domain	328	367

External Links

No external refs found!

Ore_g25528 (BP, BP1, KNAT1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation