1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g25278

Ore_g25278 (SHI)


Aliases : SHI

Description : SRS-type transcription factor & original description: none


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00161200 LRP1,... RNA biosynthesis.transcriptional activation.SRS... 0.02 OrthoFinder output from all 47 species
AT1G19790 SRS7 SHI-related sequence 7 0.02 OrthoFinder output from all 47 species
Aspi01Gene32332.t1 SHI, Aspi01Gene32332 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037267001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.05 OrthoFinder output from all 47 species
Ore_g20607 SRS1, STY1 SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!