Zm00001d037607 (GRMZM2G163054)

Aliases : GRMZM2G163054

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-c WRKY DNA-binding protein 50 (WRKY50)

Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Zm00001d037607
Cluster	HCCA cluster: Cluster_337

Target	Alias	Description	ECC score	Gene Family Method
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.05	Gene family
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.02	Gene family
AT3G01080	ATWRKY58, WRKY58	WRKY DNA-binding protein 58	0.03	Gene family
AT4G11070	AtWRKY41, WRKY41	WRKY family transcription factor	0.03	Gene family
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.02	Gene family
AT4G26440	MSP3, ATWRKY34, WRKY34	WRKY DNA-binding protein 34	0.03	Gene family
AT5G26170	ATWRKY50, WRKY50	WRKY DNA-binding protein 50	0.03	Gene family
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.02	Gene family
GSVIVT01010525001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01019419001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01020060001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01022245001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01028244001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01029265001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01030174001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01035426001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
GSVIVT01035885001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g43650	Os01g0626400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os01g46800	Os01g0656400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os01g54600	Os01g0750100	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g74140	Os01g0972800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os02g26430	Os02g0462800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os02g47060	Os02g0698800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os03g21710	Os03g0335200	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os03g55080	Os03g0758000,...	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os05g04640	Os05g0137500	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os05g39720	Os05g0474800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os05g40060	Os05g0478400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os08g29660	Os08g0386200	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os09g25070	Os09g0417800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_138256g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_2290g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
MA_54954g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
MA_7513437g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Smo92733	PACid_15420668	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc02g093050.3.1	Solyc02g093050.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc03g095770.3.1	Solyc03g095770.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc03g104810.3.1	Solyc03g104810.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Solyc04g051690.3.1	Solyc04g051690.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc08g062490.3.1	Solyc08g062490.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc12g042590.2.1	Solyc12g042590.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d009619	GRMZM2G063880	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
Zm00001d020136	GRMZM2G139815	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d020495	GRMZM2G169149	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d043063	GRMZM2G065290	No description available	0.04	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	102	158

External Links

No external refs found!

Zm00001d037607 (GRMZM2G163054)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation