Ore_g23517 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g23517
Cluster	HCCA: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
AT4G15215	ATPDR13, PDR13	pleiotropic drug resistance 13	0.03	OrthoFinder output from all 47 species
Cre12.g540650	ATPDR3, PDR3	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Gb_41757	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Ore_g26634	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	35	89
IPR013525	ABC_2_trans	152	364

External Links

No external refs found!